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Grendel overview

  General description

  • System: Grendel - AMD/Opteron cluster
    Installed 173 SUN nodes in June 2006 - retired in November 2009
    Added 95 Dell sc1435 nodes in August 2007.
    Added 335 SUN x2200 nodes in January 2009.
    Added 20 Supermicro GPU nodes in November 2009.
    Added 196 HP DL1000 nodes in December 2009.
  • Vendor: SUN, DELL Supermicro and HP
  • Provider: Atea (formerly TopNordic)
  • Total number of nodes/cores in Grendel: 579/3248
    Peak Performance: ca. 28 TFlops
  • 95 Dell SC1435 servers
    335 SUN Fire x2200 servers, 1 SUN Fire x4600 server.
    20 Supermicro servers
    196 HP DL1000 servers.
  • Each SC1435: 2 2.6 GHz DualCore Opteron w. 8 GB memory and 250 GB SATA disk.
  • 310 x2200: 2 2.3 GHz QuadCore Opteron w. 16 GB memory and 500 GB SATA disk.
  • 25 x2200: 2 2.3 GHz QuadCore Opteron w. 32 GB memory and 2 TB SATA disk.
  • 17 of the 335 SUN Fire x2200 nodes are placed at Danmarks Statistik
  • Each Supermicro server: 2.6 GHz QuadCore Intel Nehalem w. 24 GB memory 1 TB SATA disk and 2 Nvidia Tesla M1060 GPUs.
  • Each HP DL1000: 2.6 GHz QuadCore Intel Nehalem w. 24 GB memory 1 TB SATA disk.
  • The Dell and SUN servers have gigE cluster infrastructure,
    the HP and Supermicro has QDR/sDR Infiniband.
  • 100 Mb/s management infrastructure.
  • Filesystem: ca. 45 TB user-filesystem on 3 EONstor raid systems.
  • Power supply: 80 kVA G.E. UPS from Scanpocon, Odense.
  • The name Grendel is from the Nordic Mythologi:
    Grendel was a giant and he and Beowulf had a fight. Allthough Grendel
    had immunty to swords, at last he was killed by Beowulf - by a sword
    forged by giants.

  System configuration

  • Domainname: grendel.cscaa.dk
  • OS: CentOS 4.7 Linux 64 bit
  • Batchsystem: Torque and Maui
  • Scratch: Only available for running jobs on executionnodes.
  • Backup: Incremental backup of the userfilesystem every night.
    Contact Staff for more informations.

  Current Grendel-nodes at a glance

       
Node # CPU #cores Freq. Memory Network #GPUs Disk Queue
Dell SC1435 94 AMD/Opteron
2218
2 x 2 2.6 GHz 8 GB gigE - 250 GB q4
SUN x2200 292 AMD/Opteron
2356
2 x 4 2.3 GHz 16 GB gigE - 500 GB q8
SUN x2200 25 AMD/Opteron
2356
2 x 4 2.3 GHz 32 GB gigE - 2 TB qfat
Supermicro 20 Intel/Nehalem
X5550
2 x 4 2.6 GHz 24 GB gigE,
Infiniband
2 x Nvidia/
Tesla M1060
1 TB qgpu
HP DL1000 196 Intel/Nehalem
X5550
2 x 4 2.6 GHz 24 GB gigE,
Infiniband
- 1 TB q8n